Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINYKDGLAVLPDGKIVSEYPFIPGIDASGVVVNSK--SDQFQVGDEVIVTSY--D--------------------FGVSYFGGYSEFIRVPAEWVVPLPDGLSLKEAMILGTAGFTAALSVDALEFSGVTPNAGKIAVSGATGGVGSLSSAILSKRGFSVVASSGKSDAKEFLEKFGVSEIVSREA--FQPEKVRALDKQLYAGAIDCVGGKPLSYLLTAVQYGGAVTTCGMSAGGKLDTTVFPFILRGIQLFGIDSVLCPMSKRERIWNRLA-TDYKLTNLESLATEIAFSELPESLHQVMNGGVTGRYLVKVK |
| 3S2E Chain:A ((1-339)) | -AMMKAAVVRAFGAP--LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVT---DTRPG-QWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGD-FGTPIFDVVLKGITIRGSIV--GTRSDLQESLDFAAHGDVKA-----TVSTAKLDDVNDVFGRLREGKVEGRVVLDFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188791 for 2828 contacts (-66.8/contact) +
2D Compatibility (PS) -33237 + (NN) -4008 + (LL) 1356
1D Compatibility (HY) -10000 + (ID) 3350
Total energy: -238030.0 ( -84.17 by residue)
QMean score : 0.498
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