Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQMDAHQIISFIQNSKKATPVKVYLKGDLEKIDFPSDVKTFITGNAGTVFGEWAVVEPLLEANKANIEDYVIENDRRNSAIPLLDMKNINARIEPGAVIRDQVTIGDNAVIMMGASINIGSVIGDGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVVEPPSAQPVIVEDNVVVGANVVVLEGVRIGEGAVVAAGAIVTKDVAPGTVVAGIPARELKKLDAKTASKTEIMQELRQL
4EA9 Chain:A ((99-214))
-----------------------------------------------------------------------------------------VNA-IHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVS--------VGERAFLGVGARVIPGVTIGADTIVGAGGVVVRDLPDSVLAIGVPAK----------------------
General information:
TITO was launched using:
RESULT:
Template:
4EA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141817 for 980 contacts (-144.7/contact) +
2D Compatibility (PS) -13228 + (NN) -6868 + (LL) 8756
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -164457.0 ( -167.81 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_4EA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EA9-query.scw
PDB file :
Tito_Scwrl_4EA9.pdb
: