Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATNDKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFLGKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKIQ
2HMT Chain:B ((9-141))
----FAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENV----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HMT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113631 for 1026 contacts (-110.8/contact) +
2D Compatibility (PS) -14230 + (NN) -1982 + (LL) 5672
1D Compatibility (HY) -13600 + (ID) 4100
Total energy: -141871.0 ( -138.28 by residue)
QMean score : 0.719
(partial model without unconserved sides chains):
PDB file :
Tito_2HMT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HMT-query.scw
PDB file :
Tito_Scwrl_2HMT.pdb
: