Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYSYPLNPDW-TTEEMTIVVQF-LEAIERAYEK---GIDTLELKEKYR----AFKQVVPAKGE----------EKRIGIDFEKASGYSAYKVMQLVKNA-TTSKIKMQP
3FN2 Chain:A ((6-102))
--YT-------MQRDNQKTLAVYMFEEINRDVEYLSGRLSEKELKDKYRYYGRGYVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLG-WKLEFLIDEKMFEEEIL---
General information:
TITO was launched using:
RESULT:
Template:
3FN2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1725 for 341 contacts (5.1/contact) +
2D Compatibility (PS) -8525 + (NN) -3316 + (LL) 632
1D Compatibility (HY) -4800 + (ID) 900
Total energy: -15184.0 ( -44.53 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3FN2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FN2-query.scw
PDB file :
Tito_Scwrl_3FN2.pdb
: