Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELKHVIPNMEKTFGQLEFAGEGKVEQRRINGKPTILSRSYNLYSNIQRADDIVVILPAEAGEKHFEIEQKVKLVNPRITAEGYKIGTRGFTNYVMYADDIVKV
3IE4 Chain:A ((15-35))
---------------------------------------------------GFEVSIPDEEGITLFAFHGKL--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3625 for 57 contacts (-63.6/contact) +
2D Compatibility (PS) -2348 + (NN) 1275 + (LL) 5436
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -1162.0 ( -20.39 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3IE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IE4-query.scw
PDB file :
Tito_Scwrl_3IE4.pdb
: