Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVISGGLTTVELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEAKPQPKEIKQEEPKEVIQKVVEVNTNTKSTEKKLRAMKVIDLRKLAYTLDNVPIPKSKIKYANKDKLVHALKDIYGRSEN
4P2S Chain:B ((11-99))
---EALGMVETKGLTAAIEAADAMVASANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKIL---------PKGI------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4P2S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54599 for 703 contacts (-77.7/contact) +
2D Compatibility (PS) -9384 + (NN) -1877 + (LL) 5968
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -68342.0 ( -97.21 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_4P2S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4P2S-query.scw
PDB file :
Tito_Scwrl_4P2S.pdb
: