Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKKAILVVSFGTSYPETREKTIEACEKRVAHEFPDYTVFRAFTSNKIIKKLKTRDNMHINTPSQALNQLKELGYKEVIIQSLHIISGGEFEKITAQV-------------EKFKPDFDSIIVSQPLLDSMEDYEKAIEAIRHQMPPLKEQE--ALILMGHGSKHHAFSAYACLDHMLLNEPIYLCAVESYPGLDQVIERLQQADIKKAHLMPFMLVAGDHATNDMASDEENSWKSTLEQAGIQTECHLQGLGENPLIQSQFIDHIHTAIERVKTRG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2JH3 Chain:A ((1-468)) | GALRSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHL-----------PYDEVLEGYWQQEPGLRQVLRTVAYSDVTVVPVFLSEGYVTETVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPEGTDPADVTLLLLAARPGNAALETHAQALRERGQFAGVEVVLESRESAVPLSEWPSRVEAGQAVLVPFLTHLGKHAAERLQQALAQAAERFPQAPPLHVG---GPVGEHPAVAEVVLALAAEGREDERGGDIDQAHAEAWAALRHLAERGGRLGEVLLTPYGGLFELRHTLDEGRATLDLQTVVTPEGLRDLTARDEAGRWRPIRTWRTLPRGWRAVLSPADLRLGLELLYPAVIEESYAHEHRRLHWTPWMSTARRQTGTLARVQRATPDQVDTVAAQVCASCLRTRLWAGHTLGQTIFSGVPGGLPCAEACTVLLAAVRDEVGRE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -59151 for 2006 contacts (-29.5/contact) +
2D Compatibility (PS) -25775 + (NN) -5919 + (LL) 1264
1D Compatibility (HY) 800 + (ID) 1400
Total energy: -90181.0 ( -44.96 by residue)
QMean score : 0.342
|
|
|