Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKEITDATFEQE--TSEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV
3O6T Chain:B ((13-106))
---KVTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAAL--------
General information:
TITO was launched using:
RESULT:
Template:
3O6T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40136 for 623 contacts (-64.4/contact) +
2D Compatibility (PS) -9500 + (NN) -1322 + (LL) 1156
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -61552.0 ( -98.80 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_3O6T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O6T-query.scw
PDB file :
Tito_Scwrl_3O6T.pdb
: