Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNIQAMRKKVEVQIADLQNETDEIAEFNQAKVLDAFQENKVSDFHFHPSTGYGYDDE---GRDTLEHVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGMRNQGQGSLKDFHIGYSSVPLLENGDVDFPLIAEKMTRKTKMIGIQRSRGYADRPSFTIDKIKEMIIFVKNINPEVIVFVDNCYGEFAEYLEPTEVGADIIAGSLIKNPGGGLAKTGGYIAGKEALIDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAMLAEF-GVV--ADP------TWD----APR-TDLIQSISFHNK-EKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHVKIAVTRAIQKTL |
| 2RFV Chain:A ((56-333)) | ----------------------------------------------------YIYTRLGNPTTDALEKKLAVLERGEAGLA---TASGISAITTTLLTLCQQGDHIVS-ASAIYGCTHAFL------SHSMPKFGINVRFVDAA-----KPEEIRAAMRPETKVVYIETP----ANPTLSLVDIETVAGIAHQQ--GALLVVDNTFMSPYC-QQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGG--CMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVEL------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151407 for 2202 contacts (-68.8/contact) +
2D Compatibility (PS) -28161 + (NN) -15879 + (LL) 9572
1D Compatibility (HY) -8400 + (ID) 2800
Total energy: -197075.0 ( -89.50 by residue)
QMean score : 0.364
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