Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYLEENKDRVKAIFLTHGHEDAIGALPYLLQKI--KAPVYGTELTIALAKSALKEHRK--------LRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTS--SDSLIEEEIRHAFRMADGRIIVACVASNLIRLQQVLDASVATK--------RKVAIVGKELERVFEIAGSLGKIVIEEDLIVP---LKELKKY-SDDEITIIET-GN--LGEPIQSLQLMTKGNHPQLNIKPGDTVYITTTPSPSLETMMA-KTMDMLY-------KAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHE-VGMA---KSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV |
2I7T Chain:A ((9-458)) | -----SDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLE---GMD-ALPYIDLI--DPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGH-VLGAAMFMIEIAGVKLLYTGDFSRQ-----M-------AAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNR-GGRGLIPVFA--LGRAQELLLILDEYWQNHPELHDIPIYYA-----------------------FKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFES--------WCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVD----YISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNF--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213009 for 3156 contacts (-67.5/contact) +
2D Compatibility (PS) -40309 + (NN) -17965 + (LL) 13732
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -274651.0 ( -87.03 by residue)
QMean score : 0.505
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