Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIEILQNNGITDFTHLSFVELDLSKDEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPAIEGITRILQAAKEAK-VKRVVMTSNFGAIGFSNADKNSITTEAYWTD---ELAKGLSA--YEKSKLIAEKEAWKFMENETELEFATINPVAIFGPSQSNHVSGSFDLLKNLLNGSMKRVINIPL-NVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPKKTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKPISTKEEAVLAAVDSLAKYGLLD |
| 2IOD Chain:B ((7-273)) | ---TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAE--THLTLWKADLADEGSFDEAIKGCTGVFHVATPM---SKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQE-HQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAK-ENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEG-RYICSSHDCI-ILDLAKMLREKYPE------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132745 for 2104 contacts (-63.1/contact) +
2D Compatibility (PS) -27718 + (NN) -9716 + (LL) 6096
1D Compatibility (HY) -19200 + (ID) 4300
Total energy: -187583.0 ( -89.16 by residue)
QMean score : 0.510
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