Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGFGNKDIGIDLGTANTLVYMKGKG-I--------VLREPSVVAMKKDTQEIVAVGSDAKNMIGRTPGNIVAI------RPM-------------------------------KDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVMICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLPVG----EPTGSMVVDIGGGTTEVAVISLGG--IVT---SRSVRTAGDDLDEVIINYIRKKYNLL-------------IGDRTAEAIKMEIGSASPKGLDLSPFSIRGRDLVTGLPKTIEITPEEISEALADTVAAIIDAVKGTLENTPPELSADIMDKGIVLTGGGALLRNLDTVISEETK-MPVIIADEPLDCVAIGTGKALENMDMYKRKKMN |
| 3I33 Chain:A ((23-401)) | -----MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD---TERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQ-----ASIEIDS--LYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDK---GQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147362 for 2605 contacts (-56.6/contact) +
2D Compatibility (PS) -33433 + (NN) -11265 + (LL) 1100
1D Compatibility (HY) -8400 + (ID) 3400
Total energy: -202760.0 ( -77.83 by residue)
QMean score : 0.407
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