Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKKTPFIISGIGLLGFIFFMTGVMT-GAKWIQRFDHYWNSVIRVGITDTKTTVISYL----------TDIGGVATICILTAIIIIVFVFMRKVDTAIWFGSIVLIGGALIPSIIKNI-VQRPRPTYKLIEQGG---FSFPSGHSTGSTVFYGMLAFLLILYV-SRSWLRFTIGILALGIVIFVM-YSRVYLGVHFPSDVVAGFLIGNAA-LF-SGIGC-YFIWNEKLALWANKFKKA---------------------------------------------------------- |
| 3C24 Chain:A ((6-285)) | KNDVGPKTVAILGAG-----------GKMGARITRKIHD---SAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVLILDAAAPYA--GVMPERADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPE-----EHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGHLNVEIAMWFGYSPKVAALRLMEFAKDIVVKEDWREALNPAKVKQAAELIAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199121 for 1438 contacts (-138.5/contact) +
2D Compatibility (PS) -20401 + (NN) -239 + (LL) 2160
1D Compatibility (HY) 2000 + (ID) 1550
Total energy: -217151.0 ( -151.01 by residue)
QMean score : 0.219
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