Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLIDNYDSFTFNLEQYLAEF-SEVVVKRNDAADLIKIAA-LADGIVLSPGPGKPSDA---GLLEEVVAK-FAKEKPLLGICLGHQAIGEVFGGEVKRAAKIRHGKVSTMRQ-----------------------------TAGAIFANLPE-EMPVMRYHSLIVDKNTLPDVLEVLAIATDDSEVMAMKVKDYPVYGLQFHPESIGTNDGKQMMENFIHIVEGARENGNLTTKSI
3UOW Chain:A ((9-266))
KILVLNFGSQYFHLIVKRLNNIKIFSETKDYGV-ELKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSKTSEYGCTD-VNILRNDNINNITYCRNFSSAMDLYSNYKLMN--CCLFENIKSDITTVWMNHNDEVT--KIPENFYLVSSSE-NCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKK-FDPI----
General information:
TITO was launched using:
RESULT:
Template:
3UOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110589 for 1594 contacts (-69.4/contact) +
2D Compatibility (PS) -20027 + (NN) -5585 + (LL) 512
1D Compatibility (HY) -10400 + (ID) 2350
Total energy: -148439.0 ( -93.12 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_3UOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UOW-query.scw
PDB file :
Tito_Scwrl_3UOW.pdb
: