Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVENKVIVLAGMIGAGKSSYTELIANEL-GTKAFYESIKD---------NRILEMFYDDPKRWAFALQIYFLNTRFRSIKAA-------------LTDQNNVLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNPGLLEYYKHLHSRYDSWFAS---------YDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
1P5Z Chain:B ((23-261))
----RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYE-----SECMNETEWTIYQDWHDWMNNQFG--QSLELDGIIYLQATPETCLHRIYLRGRNEEQ---GI-PLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNE-DFKD--KYESLVEKVKEFLS-
General information:
TITO was launched using:
RESULT:
Template:
1P5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90152 for 1443 contacts (-62.5/contact) +
2D Compatibility (PS) -21313 + (NN) -10585 + (LL) 1076
1D Compatibility (HY) -14400 + (ID) 2850
Total energy: -138224.0 ( -95.79 by residue)
QMean score : 0.480
(partial model without unconserved sides chains):
PDB file :
Tito_1P5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P5Z-query.scw
PDB file :
Tito_Scwrl_1P5Z.pdb
: