Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIENELEHAKKTEKIEFGVNRRLIFSSCLLWMAVGLLLYVVFSHIKGVNGIEEMILLVFIGLCVLRPLFRLINIAPTVELTERGVAYRGDFKSWNEIKKTELKKPAMMLFSQGRLIIMTSINGREEVAWDIVAADVSISLEE-LEKLIQSMRSTYTDDETIGMEIFVEKK---- |
2K3M Chain:A ((25-151)) | --MSDFDTERVSRAVAAALVG---------------------------PGGVALVVKVCAGL-------------PGVIHTP---ARRGFFRCNPE--RIQIGDWRYEVAHDGRLLAAHMVNGIVIAEDALIAEAVGPHLARALGQIVCRYGATVIPNINAAIEVLGTGTDYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K3M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36444 for 675 contacts (54.0/contact) +
2D Compatibility (PS) -12158 + (NN) 3882 + (LL) 5172
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: 26990.0 ( 39.99 by residue)
QMean score : -0.053
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