Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------------------LSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRK---EVLKNAPDEQDGMFKVPTIMEQ
4N0H Chain:F ((6-153))
GAKIGKKFENMNQIRDYLSRPVWSVHEYLGEPPSAEAVKKLLRLSGLPLEGADIKEIQMRLAKQLSFINKLHNIPVENTKQLNYTKLLEGISHQKQDAELGEVSGSWKATGLAAESKNAYFVVKE----
General information:
TITO was launched using:
RESULT:
Template:
4N0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1792 for 383 contacts (-4.7/contact) +
2D Compatibility (PS) -9816 + (NN) -2008 + (LL) 636
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -16430.0 ( -42.90 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_4N0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N0H-query.scw
PDB file :
Tito_Scwrl_4N0H.pdb
: