Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIAALGLTLVLSGCAPKLDSNDKVVQKDDSKAETGIMTKNQISSNYYKTVLPYKASKSRGLVVSNI-YSRYDINELESGLMRVSQNKYSPDNYLFQEGQYLDKETLEKWLDRK-----------------SDKNPNGLNPASNGNG-----ENRKPIYLAHILEQDYLKQTDKD-TVALGGISIALAM-NSVDYYQKEKYGDTYEQPISDSELLAQGKEMSATVLNRIRQTKGLENVPVTIAIYKQGARDAVAPGNYIAYATAN-GDSLSNWKDIDEKNYVLPSTESAKDHKTDNDNFLNFKKAIEDYYPNFTGVVGRGRYEDGQLAELNIDIPLQFYGEAEIIGFTQYVTDLVGQHIPKTADLQVNISTSDGPAALITRKANEDAATAHIYD- |
| 2QX2 Chain:A ((13-344)) | -----------------------------------------------------------------LLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETNPEKIAEKSPAYLSNILEQDFYGKNIKGMTIGLA--------MNSVYYYKKEKDGPTFSKKLDDSEVKKQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLEWHNINEKSALLPS-------STAADYDENLNNNFKQFNDNLQQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYSN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QX2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56643 for 2186 contacts (-25.9/contact) +
2D Compatibility (PS) -31441 + (NN) -10130 + (LL) 5228
1D Compatibility (HY) -22000 + (ID) 5200
Total energy: -120186.0 ( -54.98 by residue)
QMean score : 0.469
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