Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MYLCENENAYR-------RRNSGNLEIEMSEITLRNRK-------PKRKIGKWIAIIL--GIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVW-----------VPKKKSDKVYVKFASDGITEQQARDKVTKEKKPKK------ILHVNLGMEKETPIWEVAYL--DKNDKLNYFDINFETGE-----WYREIENL----------------- |
| 1YPT Chain:A ((191-468)) | PEARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRRQTAVRADLNANYIQVGNTRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMPDYFRQSGTYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKTISVPVVHVGNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHCRAGVGRTAQLIGAMCMNDSRNSQLSVEDMVSQMRVQRNGIMVQKDEQLDVLIKLAEGQGRPLLNS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YPT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22804 for 1330 contacts (-17.1/contact) +
2D Compatibility (PS) -20102 + (NN) 2947 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -43809.0 ( -32.94 by residue)
QMean score : 0.239
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