Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKGTIVIVGLGLIGGSIALAIKAKHPEAHIIGIDVSYHSLEVGKSLGVIDEI--GESILIDGPKADLLIFCCPVKETEQLLMRLPGLRLKENVIVTDTGSTKGTIMEASTALRESGITFIGGHPMAGSHKSGVRAAKELLFENAYYLLTPTKD-VT-------EDNVTDLKTWLSGTNAKFLVLSPNEHDEITGMLSHLPHIVAAALVNQTQSFTEEHPAAFRLAAGGFRDITRVASSDPRMWTDISISNKKTLTKQLTIWRDSMNQALEMLESEDATSIYAFFDGAKEFRDSLPVHQGGAIPSFYDLFVDVPDYPGVISEVTRYLGEEEISLTNIKILETREDIFGVLQITFQSDEDRDRAKRCIETRSNYTCHYE |
| 3KTD Chain:A ((8-339)) | -SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHT-HA-PNNGFTDVVSVKTAVYDAVKARN-MQHRYVGSHPMAGTA-SGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAIVGDN---GGALSLSLAAGSYRDSTRVAGTDPGLVRAMCESNAGPLVKALDEALAILHEAREGLTAEQ-PNIEQLADNGYRSRIRYEARSGQ--SSRPVLRL-HPGTPNWEKQL-IHAETLGARIE------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106501 for 2420 contacts (-44.0/contact) +
2D Compatibility (PS) -32422 + (NN) -5329 + (LL) 4492
1D Compatibility (HY) -8400 + (ID) 3850
Total energy: -152010.0 ( -62.81 by residue)
QMean score : 0.368
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