Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDRELAEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIRADYAIHTNRNVIHGSDSPESAQREIQLFFAPDEILSYQKAVDTWI
3Q89 Chain:E ((1-147))
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWL
General information:
TITO was launched using:
RESULT:
Template:
3Q89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69299 for 1116 contacts (-62.1/contact) +
2D Compatibility (PS) -15678 + (NN) -3133 + (LL) 0
1D Compatibility (HY) -16800 + (ID) 4400
Total energy: -109310.0 ( -97.95 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_3Q89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q89-query.scw
PDB file :
Tito_Scwrl_3Q89.pdb
: