Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVIVACGSGVATSQTVASKVERILKEKGVRATVEAVDIKSLEQHIKTSDVYVAITKANKEFDIPTLNGIAFLTGMGMDEETEKLLNALK
2HNA Chain:A ((1-57))
MADITLISGSTLGGAEYVAEHLAEKLEEAGFTT--ETLHGPLLE-DLPASGIWLVISSTH-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HNA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23941 for 364 contacts (-65.8/contact) +
2D Compatibility (PS) -6003 + (NN) -17 + (LL) 2416
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -32595.0 ( -89.55 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_2HNA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HNA-query.scw
PDB file :
Tito_Scwrl_2HNA.pdb
: