Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYQLVIVGYGGMGSYHVTLASA-ADNLEVHGVFDILEEKREAA-AEKGLK-IYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSEDLLAIMDVAKKV-NKHFMVHQNRRWDEDFLIIKEIFEQKTIGEMFHLESRVHGANGIPGDWR--HLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFAL-----GDEVDDGFVTFITFENGITAQIEVGTTNF-IKLPRWYVKGTEGTGIIHDWDLSGEIVQPTALAKTSEPTPIKAGQGLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFIDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNRTIHSI |
| 3CEA Chain:A ((6-344)) | RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGKIIYMRGYGIDPISGMESFTKFATEADSGGIFVDMNIHDIDLIRWFTGQDPVQAYGLTSNIAAPQLADIGEFETGVAQLKMSDGVIATLIGGRHAAHGNQVELEVMGSNGWVRIGEHPDLNRVTVFNDQ-------------GVVR---PSL----QSFG-ERFDTAFTDEVQDFVNNVIVGKQPEVTVDDGIKALKIAKACQQSANIGKLVDI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202667 for 2756 contacts (-73.5/contact) +
2D Compatibility (PS) -35360 + (NN) -9734 + (LL) 1656
1D Compatibility (HY) -8800 + (ID) 3100
Total energy: -258005.0 ( -93.62 by residue)
QMean score : 0.493
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