Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDL--PLVGIPSSSK-KLPKRY--ADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEADLKSGFEGADLEADFLDF---TSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKKK-KPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQ--KVEYLASNTEYLQSANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFG-MTASLN-APEALKEMEKMLYDN
3GFV Chain:A ((27-298))--------------------------GTKVPKNPKKVVVFDFGSLDTLDKLGLDDIVAGLPKQVLPKYLSKFKDDKYADVGSLKEPDFDKVAELDPDLIIISARQ-SESYKEFSKIA-PTIYLGVDTAKYMESFKSDAETIGKIFDKEDKVKDELANIDHSIADVKKTAEKLNKNGLV--IMANDGKISAFGPKSRYGLIHDVFGVAPADQNIKASTHGQSVSYEYISKTNPDYLFVIDRGTAIGE-TSSTKQVVENDYVKNVNAVKNGHVIYLDSATWYLSGGGLESMTQMIKEVKDGLEKE


General information:
TITO was launched using:
RESULT:

Template: 3GFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73560 for 2151 contacts (-34.2/contact) +
2D Compatibility (PS) -28053 + (NN) -13249 + (LL) 3796
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -123216.0 ( -57.28 by residue)
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_3GFV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFV-query.scw
PDB file : Tito_Scwrl_3GFV.pdb: