Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPDVRSSLLGHNVWVLIPLVAIISWMVVEIFS
1JUN Chain:A ((1-43))
CGGRIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVMNY--------------------
General information:
TITO was launched using:
RESULT:
Template:
1JUN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2306 for 168 contacts (13.7/contact) +
2D Compatibility (PS) -4816 + (NN) -2925 + (LL) 2832
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -4203.0 ( -25.02 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_1JUN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JUN-query.scw
PDB file :
Tito_Scwrl_1JUN.pdb
: