Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHHETTW--LHEAAAGTIEPEKLMYPLDKVVNDTKTTFIQDTVVKINKDEKTVTLDANGDISYDYLLIALGSEAETFGISGLK-EYAFTITSVESVKKIRAHIEAQFAKWKTDPRDELLTIIVGGAGFTGIEFLGELTNRIPELVKQYDVPREKVRIYCMEAAPKVLPQ-FDAKLVDYGVGVLEDRGVEFHVGKPVKEATADG-----VKYAESENEVREIKAATIIWAAGVRGNSVIE-ASGFEAGRGRVKVNNNLTVPGNEEILIVGDCSLIINPANDR-PFPPTAQIAMQQADVAAVNLAKLVKGETDLQDFVY--HEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGVLASKGKFKFYK |
| 3FG2 Chain:P ((1-337)) | --NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM------------PDKKHVVVIGAGFIGLEFAATARAK-------------GLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIA-AEGDRVTGVVLSD--G-NTLPCDLVVVGVGVIPNVEIAAAAGLPT-AAGIIVDQQLLT-SDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKPYD-GYPWFWSDQGDDKLQIVGLTAG--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204424 for 2710 contacts (-75.4/contact) +
2D Compatibility (PS) -35181 + (NN) -10763 + (LL) 4632
1D Compatibility (HY) -14400 + (ID) 3200
Total energy: -263336.0 ( -97.17 by residue)
QMean score : 0.441
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