Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIKKEHRDATHNCSAYIIG--ENDQYQKAHDDGEPSGTAGFPMLEILKKKSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFTEKVVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT
1VI7 Chain:A ((3-208))
LMESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRAEHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGVGEITAVVVRYYGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEEE-------
General information:
TITO was launched using:
RESULT:
Template:
1VI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117683 for 1570 contacts (-75.0/contact) +
2D Compatibility (PS) -22661 + (NN) -7746 + (LL) 528
1D Compatibility (HY) -12000 + (ID) 3000
Total energy: -162562.0 ( -103.54 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_1VI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VI7-query.scw
PDB file :
Tito_Scwrl_1VI7.pdb
: