Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MTANQME-RKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE
1R0U Chain:A ((1-146))
GFQSNAMKQETPITLHVKSVIEDDGNQEVIEFRTTGFYYVKQNKVYLSYYEEHDLGKVKTIVKVSEGEVLVMRSGAVKMNQRFVT-GASTIAKYKMSFGELELKTSTKSIQSDLDEE---KGRISIAYDMHVGH----LHNMTITYEGGT-
General information:
TITO was launched using:
RESULT:
Template:
1R0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43628 for 976 contacts (-44.7/contact) +
2D Compatibility (PS) -14506 + (NN) 1875 + (LL) 232
1D Compatibility (HY) -10800 + (ID) 1700
Total energy: -68527.0 ( -70.21 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_1R0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R0U-query.scw
PDB file :
Tito_Scwrl_1R0U.pdb
: