Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVGLTKAS---------------TDFV-DIEIDKPVPENHDLLVKIKAISINPVDTKQREAA-------------KL-----SGEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGDV------------------------TRPGVYAEYTLIDERLVGLKPHNLNVEEAAAMPLTTITAWEALFD--RLTITENDKGKSILIINGAGGVGSIATQLAANTGLEVIATASRSETVEWTKSHGANYVINHREN------------------IPEQLEELG-FKKGVDFILCLHNTSAHWDEMQEAIRPQGKICSIVELTEPV-EM--TLLKDKSATFSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE |
| 3KRT Chain:A ((31-421)) | YRAITVHKDETEMFAGLETRDKDPRKSIHLDD-VPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMK---QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGE-DIDIVFEH-PGRETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRII------------GSHFANYREAWEANRLIAKGRIHPTLSKVY-SL--EDTGQAAYDVHRNLHQGKVGVLC-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181123 for 2796 contacts (-64.8/contact) +
2D Compatibility (PS) -32288 + (NN) -748 + (LL) 1356
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -228453.0 ( -81.71 by residue)
QMean score : 0.531
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