Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDLNWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKQVRDLLVYKIDSYDSHIAQFKAGELNADNVEKLWERDKF
3QAO Chain:A ((4-107))
MQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKELDFPLKKIQQILDDPLFDKN-VALDMQRHLLIEKKQRIETMLATLDLTIK-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43589 for 617 contacts (-70.6/contact) +
2D Compatibility (PS) -11426 + (NN) -6562 + (LL) 2792
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -66185.0 ( -107.27 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3QAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QAO-query.scw
PDB file :
Tito_Scwrl_3QAO.pdb
: