Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLVRKPRQSKIKKSTSPALNKGLNSFKRELTDVNSPQKRGVCTRVGTMTPKKPNSALRKYARVRLSNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTAGVENRGQSRSKYGTKKPKK
2UUC Chain:L ((5-122))
-PTINQLVRKGREKVRKKSKVPALK-------------GAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGT-----
General information:
TITO was launched using:
RESULT:
Template:
2UUC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19151 for 791 contacts (-24.2/contact) +
2D Compatibility (PS) -12554 + (NN) -4245 + (LL) 1028
1D Compatibility (HY) -11200 + (ID) 4500
Total energy: -50622.0 ( -64.00 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2UUC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UUC-query.scw
PDB file :
Tito_Scwrl_2UUC.pdb
: