Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFLKELESNLTVSKLMELCFEHPNYKDYCSVISTKKGEVLESLSPAGTKVYFVLSGIYGMIVEEDAEMEEESCKECIVRFLQKGDSFGLYHLFYDEWSPHVSMQSLGHGEVMEVDSNFLFSIFDKKDENNFFMIKVMAEELREAHT-FAKLSFLKKEERIRKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNR-PKPLLVMDKTRL
1FT9 Chain:A ((17-209))
-----------------------ETFFRGFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVG-------EEREISLFYLTSGDMFCM-------HSGC-LVEATERTEVRFADIRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQT--GVIVSVDFTVEEIANLIGSSRQTTSTALNSLIKEGYISRQGRGHYTIPNLVRL
General information:
TITO was launched using:
RESULT:
Template:
1FT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78088 for 1289 contacts (-60.6/contact) +
2D Compatibility (PS) -20746 + (NN) -11832 + (LL) 3780
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -118286.0 ( -91.77 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_1FT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FT9-query.scw
PDB file :
Tito_Scwrl_1FT9.pdb
: