Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFANLYSAPITDKEVT-----KYTTDTKNSVKSMKKIVEWIKKGYLMNGSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDGK-PDLEYLVNGFAVFNNKDENKVKASKKFIT-FIADDKKWGPKDVIRTGA-FPVRTSFGDLYKGDK-RMMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
3WOA Chain:A ((24-416)) | EKKKNELGLSQESVADKMGMGQSGSGM-----KIEEGKLVIWINGD--KG------YNGLAEVGKKFEKD-TGIKVTVEH--PDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKA--FQDKLYPFTWDAV-RYNGKLIAYPIAVEALSLIYNKDLLPN------PPK--TWEEIPALDKELKAKGKSALMF-NLQ--EPYFTWPLI-AADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADT--DYSIAEAAFNKGETAMTINGPWAWSNIDT-----SKVNYGVTVLPTFKGQPSKPFVGVLSAGINAA--SPNKELAKEFLENYLLTDEGL-EAVNKDKPLGAVALKSYEEELAKDPRIAATMENA-Q-KGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36717 for 3275 contacts (-11.2/contact) +
2D Compatibility (PS) -40730 + (NN) -14657 + (LL) 3364
1D Compatibility (HY) -4000 + (ID) 3750
Total energy: -96490.0 ( -29.46 by residue)
QMean score : 0.367
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