Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD
3UGO Chain:A ((110-184))
-AARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEY--KRRFKFSTYATWWIRQAINRAIADQAR---------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44223 for 499 contacts (-88.6/contact) +
2D Compatibility (PS) -7835 + (NN) -3305 + (LL) 6496
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -52067.0 ( -104.34 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_3UGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UGO-query.scw
PDB file :
Tito_Scwrl_3UGO.pdb
: