Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKITTSLFQEMVQAASTRLSKQAEYVNSLNVFPVPDGDTGTNMGMTMENGAKEVSDKPATTVGEVGQILSKGVLMGARGNSGVITSQLFRGFGQSIKDKEELTGQDLAHAFQNGVEVAYKAVMKPVEGTILTVSRGAATAALKKAEETDDAVEVMRATLKGAKRALAKTPEMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFKATPATMTEMVNAEHHKAVVGHVATEDIKYGYCTEVMVGLKQGPTYVKEFNYEEFQGYLSNLGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVENMRNQHDAQMQKVEVEETVKETKEYGIIAVVAGDGLAEIFKSQGVDYIISGGQTMNPSTEDIVKAIEKVNARNVIILPNNKNIFMAAQSAADVVDIPAAVVETRTVPQGFTSLLAFDPAKSLETNVADMTNSLSDVISGSVTLAVRDTTIDGLEIHENDILGMVDGKILVSTPDMEKALKDTFDKMIDEDSEIVTIYVGEDGKQALAETLSEYLEETYEDVEVEIHQGDQPVYPYLMSVE |
| 1K4G Chain:A ((11-382)) | RPRFSFSIAAREGKARTGTIEMKRGVIRTPAFMPVGT-----------AATVKALKPETVRATG-ADIILGNTYHLMLR------------------PGAERIAKLGGLHSFMG------------WDRPILTDSGGYQVMSLSSLTKQSEEGVTFKSHLDGSRHML-SPERSIEIQHLLGS------DIVMAFDECTPYPATPSRAASSMERSMRWAKRSRDAFDSRKEQAEN-----------AALFGIQQGSVF--------------------------------------------------------ENLRQQSADALAEIGFD------------GYAVG-GLAV---GEG-------QDEMFRVLDFSVPMLPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRN---------------------------------GQAFTWDGPINIRNARFSEDLKPLDSECHCAVCQKWSRAYIHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18554 for 3354 contacts (-5.5/contact) +
2D Compatibility (PS) -38533 + (NN) 3941 + (LL) 10700
1D Compatibility (HY) -5200 + (ID) 2550
Total energy: -50196.0 ( -14.97 by residue)
QMean score : 0.217
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