Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEQKLDHLVSQILLKAENQHELLFGTCQSDVKLTNTQEHILMLLSQEQLTNSDLAKKLNISQAAVTKAVKSLISQDMLKANKDSKDARITYFELSELAKPIADEHTHHHDNTLGVYGRLVNHFSKDEKVVLERFLDLFSRELEG
3KP7 Chain:A ((1-145))
MVRRIEDHISFLEKFINDVNTLTAKLLKDLQTEYGISAEQSHVLNMLSIEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL---------KIIKLSNKGKKYIKERKAIMS---HIASDMTSDFDSKEIEKVRQVLEIIDYRIQS
General information:
TITO was launched using:
RESULT:
Template:
3KP7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54291 for 801 contacts (-67.8/contact) +
2D Compatibility (PS) -13917 + (NN) -5368 + (LL) 464
1D Compatibility (HY) -9600 + (ID) 1300
Total energy: -84012.0 ( -104.88 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_3KP7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KP7-query.scw
PDB file :
Tito_Scwrl_3KP7.pdb
: