Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSEIFKFCISILWYFILTKNKGVVVMRAWKGIVLILSSIVVTLVAWQNAGLSEFVVPGLALTSLSLTFLLSTKFRILESYFQGIENMYFYHKVMAVFSMILLLLHKIGLGQGGHGSEFAKTIGSAGLYLFLSIVFVAYFGNFLKYEIWRFIHRFVYLVYILGLVHTFLILGDRILGNTLLSLIVLGYAVIGVISGFYIIFLYSRMRFRRVGYVQKVTHLNHD-----TTEIEIAMK-RPYRYDYGQFTFLKIYQAGF---ESAAHPFSISGGHD------RVIFLTVKA------------SGDYTKSIYKQLKVGTKIALDRAYGHMLFDK--DKKEQVWIAGGIGITPFISFIRENSIL-----------TKRVDFFYTFSNQDNLIYQDMLESYAKANP-NFKLHLNNSSLQ-----GRLDFSQSV-----------FEGQPTIFMCGPTSMTSTYAKVFRQKDAKSRLVYEGFSFRDSWLSIFLLKTFDKVYSNLIK |
| 2BMW Chain:A ((21-304)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLT-HIEPGSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTPNILYKEELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGPPPMEEGIDAALSAAAAKEGVTWSDYQKDLKKAGRWHVETY--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139429 for 1776 contacts (-78.5/contact) +
2D Compatibility (PS) -24342 + (NN) -1590 + (LL) 20660
1D Compatibility (HY) -10800 + (ID) 2100
Total energy: -157601.0 ( -88.74 by residue)
QMean score : 0.505
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