Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLQDQIIKELGVKPVINPSQEIRRSVEFLKDYLLKHSFLKTYVLGISGGQDSTLAGRLAQLAVEELRADTGENYQFIAIRLPYGIQADEEDAQKALDFIKPDIALTINIKE---AVDGQVRALNAAGVEITDFN----KGNIKARQRMISQYAVAGQYAGAVIGTDHAAENITGFFTKFGDGGADLLPLFRLNKSQGKQLLAELGADKALYEKIPTADLEENKPGIADEIALGVTYQEIDAYLEGKVVSDKSRGIIENWWYKGQHKRHLPITIFDDFWK |
3FIU Chain:B ((7-246)) | ----------------FSPKEYSQKLVNWLSDSCMNYP-AEGFVIGLSGGIDSAVA---ASLAVKTGLPTT-------ALILP-SDNNQHQDMQDALELIE-----MLNIEHYTISIQPAYEAFLASTQSFT---QLVIKGNAQARLRMMYLYAYAQQYNRIVIGTDNACEWYMGYFTKFGDGAADILPLVNLKKSQVFELGKYLDVPKNILDKAPSAGLWQ---GQTDEDEMGVTYQEIDDFLDGKQVSAKALERINFWHNRSHHKRKLALTPNF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7372 for 1818 contacts (-4.1/contact) +
2D Compatibility (PS) -24441 + (NN) -7551 + (LL) 2528
1D Compatibility (HY) -16400 + (ID) 4850
Total energy: -58086.0 ( -31.95 by residue)
QMean score : 0.402
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