Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFASPSRYIQGKDALFQSIEHIKSLG-QTPLILCDDVVYNI--VGERFLSYLQ-DDLLPH-RVSFNGEASDNEINRVVAVAKEKNSDLIIGLGGGKTIDSAKAIADKV------------------NLPVVIAPTVASTDAPTSALSVIYTDEGAFE-KYIFYSKNPDLVLVDTQVIAQAPKRLLASGIADGLATWVEARAVLQKNGIAMAGGRQTLAGVAIAQACERTLFNDSLQALAACDAKVVTKALENVIEANTLLSG---LGFES-AGLAAAHAIHNGFTALSGDIHHLTHGEKVAYGTLTQLFLENRP-----------------------KEEIDRYINLYQAIGMPTTLAELHLGDATYEELLKVGQQATIEGE-------TIHEMPFKISAEDVAAALLTVDRYVSNHQ |
| 1VLJ Chain:A ((17-406)) | --VFHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNGNAVITNEKTKEKYGVSSKALYPKVSIIDPSVQFTLPKEQTVYGAVDAISHILEYYFDGSSP----------EISNEIAEGTIRTIMKMTERLIEKPD---DYEARANLAWSA-TIALNGTMAVGRRGGEWACHRIEHSLSALY----DIAHGAGLAIVFPAWMKYVYRKNPAQFERFAKKIFGFEGEGEELILKGIEAFKNWLKKVGAPVSLKDAGIPE---EDIDKIVDNVMLLVEKNLKPKGASLGRIMVLEREDVREILKLAAK------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -150232 for 3002 contacts (-50.0/contact) +
2D Compatibility (PS) -36385 + (NN) -15370 + (LL) 1788
1D Compatibility (HY) -9200 + (ID) 3450
Total energy: -212849.0 ( -70.90 by residue)
QMean score : 0.535
|
|
|