Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRYGVVSTAKVAPRFIEGVRL-AGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESC-NLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNID--HVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTA-TFP-----KGQSDSQSKLLLQLSNGVLVDIFLTTRLNL--PHEMIIYGTEGRLIIPHFWKTTHAKLVRND--TSARTI----QVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGK |
| 3CEA Chain:A ((6-338)) | RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGKIIYMRGYGIDPISGMESFTKFATEADSGGIFVDMNIHDIDLIRWFTGQDPVQAYGLTSNIAAPQLADIGEFETGVAQLKMSDGVIATLIGGRHAAHGNQVELEVMGSNGWVRIGEHPDLN-R-VTVFNDQGVVRPSLQSFGERFDTAFTDEVQDFVNNVIVGK--QPEVTVDDGIKALKIAKACQQSANI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191013 for 2617 contacts (-73.0/contact) +
2D Compatibility (PS) -33360 + (NN) -6328 + (LL) 400
1D Compatibility (HY) -7600 + (ID) 2700
Total energy: -240601.0 ( -91.94 by residue)
QMean score : 0.520
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