Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRIYPERLLESAKTIISIGVAYPHKLPQQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDKPVDYDCGDCRR--CLDACPTSCLIGD-----GSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDICQICCPYNKGINNPLATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILEFMSNLTLKDEDSRKELELIRHKWQF |
| 3MM5 Chain:B ((206-255)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIRKTCEIPSTVAACPTGALKPDMKNKTIKVDVEKCM-----------------------YCGNCYTMCPGMPLFDPENDGAAIMVGGKLSEARRMPELSKVVVPWVPNEPPRWPTLVKYVKQILEAWAANANKHERLIEWVDRIGWERFFELTGLEFTQHLIDDYRITPYFYSEFRASTQFKW-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21349 for 261 contacts (-81.8/contact) +
2D Compatibility (PS) -4611 + (NN) -2630 + (LL) 14180
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -16210.0 ( -62.11 by residue)
QMean score : 0.354
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