Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
3PDW Chain:A ((4-256))
KTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSMATAQHIAQQKKDASVYVIGEEGIRQAIEENGLTFGGENADFVVVGIDRSITYEKFAVGCLAIRNGARFISTNGDIAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTG------MTDDMEKPTHAIDSLTEWIPYIE
General information:
TITO was launched using:
RESULT:
Template:
3PDW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149244 for 2166 contacts (-68.9/contact) +
2D Compatibility (PS) -27304 + (NN) -14483 + (LL) 636
1D Compatibility (HY) -23200 + (ID) 5950
Total energy: -219545.0 ( -101.36 by residue)
QMean score : 0.635
(partial model without unconserved sides chains):
PDB file :
Tito_3PDW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PDW-query.scw
PDB file :
Tito_Scwrl_3PDW.pdb
: