Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKCPIIALDFSDLASVTTFLEHFPKEELLFVKIGMELYYSEGPSIIRYIKSLGHRIFLDLKLHDIPNTVRSSMSVLAKLGIDMTNVHAAGGVEMMKAAREGLGEGPI----LLAVTQLTSTSQEQMQVDQHINLSVVDSVCHYAQKAQEAGLDGVVASAQEVKQIKKQTNEHFICLTPGIRPPQTNQLDDQKRTMTPEQARIVGADYIVVGRPITKAENPYQAYLEIKEEWNRIK
1EIX Chain:A ((12-242))
VTNSPVVVALDYHNRDDALAFVDKID-PRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGM-TLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQG-SEAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQ---
General information:
TITO was launched using:
RESULT:
Template:
1EIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127718 for 1941 contacts (-65.8/contact) +
2D Compatibility (PS) -24416 + (NN) -9904 + (LL) 688
1D Compatibility (HY) -10800 + (ID) 4500
Total energy: -176650.0 ( -91.01 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1EIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EIX-query.scw
PDB file :
Tito_Scwrl_1EIX.pdb
: