Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSEAIIAKKAEQVELIAEKMKAAASIVVVDSRGLTVEQDTNLRRSLRESDVEFKVIKNSIL-----IRAAEKAGLEDLKELFVGPSAVAFSNEDVIAPAKVISDFAKDAEALEIKGGSVDGKFTSVEEINALAKLPNKEGMLSMLLSVLQAPVRNVAYAVKAVAEKDEEVA---------------------------------------------------------- |
| 4W8J Chain:A ((33-1178)) | YTPIDISLSLTQFLLSEFVPGAGFVLGLVDIIWGIFGPSQWDAFLVQIEQLINQRIEEFARNQAISRLEGLSNLYQIYAESFREWEADPTNPALREEMRIQFNDMNSALTTAIPLLAVQNYQVPLLSVYVQAANLHLSVLRDVSVFGQRWGFDAATINSRYNDLTRLIGNYTDYAVRWYNTGLERVWGPDSRDWVRYNQFRRELTLTVLDIVALFPNYDSRRYPIRTVSQLTREIYTNPVLENFDGSFRGSAQGIERSIRSPHLMDILNSITIYTDAHRGYYYWSGHQIMASPVGFSGPEFTFPLYGTMGNAAPQQRIVAQLGQGVYRTLSSTLYRRPFNQQLSVLDGTEFAYGTSSNLPSAVYRKSGTVDSLDEIPPQNNNVPPRQGFSHRLSHVSMFRSGFVSIIRAPMFSWIHRSAEVNNIIASDSITQIPAVKGNFLFNGSVISGPGFTGGDLVRLNSSNIQNRGYIEVPIHFPSTSTRYRVRVRYASVTPIHLNVNWGNSSIFSNTVPATATSLDNLQSSDFGYFESANAFTGNIVGVRNFSGTAGVIIDRFEFIPVTATLEAEYNLERAQKAVNALFTSTNQLGLKTNVTDYHIDQVSNLVTYLSDEFSLDEKRELSEKVKHAKRLSDERNLLQDSNFKDINRERGWGGSTGITIQGGDDVFKENYVTLSGTFDESYPTYLYQKIDESKLKAFTRYQLRGYIEDSQDLEIYLIRYNAKHETVNVPGTGSSAHHSHHFSLDIDVGSTDLNEDLGVWVIFKIKTQDGHARLGNLEFLEEKPLVGEALARVKRAEKKWRDKREKLEWETNIVYKEAKESVDALFVNSQYDQLQADTNIAM-IHAADKRVHSIREAYLPELSVIPGVNAAIFEELEGRIFT-AFSLYDARNVIKNG----DFNNGLSSWNVKGHV---DVEEQNNQRSVLVVPEWEAEVSQEVRV--SPGRGYILRVTAYKEGYGEGSVTIHEIENNTDELKFSNPVGYVTKELEYFPETDKVWIEIGETEGTFIVDSVELLLMEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4W8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12990 for 934 contacts (-13.9/contact) +
2D Compatibility (PS) -16182 + (NN) -837 + (LL) 504
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -37005.0 ( -39.62 by residue)
QMean score : 0.266
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