Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIREQEFVNQYHYDARNLEWEEENGTPKTNFE-----VTFQ-LANRDEAAKVTSIVAVLQFVIVRDEF----VISGVISQMAHIQGRLINEPSEFSQDEVENLAAPLLEIVKRLTYEVTEIALDRPGVTLEFNS
1KVE Chain:? ((19-81))
-----------------WSLRWRMQKSTTIAAIAGCSGAATFGGLAGGIVGCIAAGILAILQGFEVNWHNGGGGDRSNPV--------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1KVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13508 for 231 contacts (-58.5/contact) +
2D Compatibility (PS) -5420 + (NN) -1040 + (LL) 6240
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -15978.0 ( -69.17 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_1KVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KVE-query.scw
PDB file :
Tito_Scwrl_1KVE.pdb
: