Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKQYDYIVIGGGSAGSGTANRAAMYGAKVLLIEGGQ----------VGGTCVNLGCVPKKIMWYGAQVSETLHKYSSGYGFEVNN-LNFDFTTLKANRDAYVQRSRQSYAANFERNGVEKIDGFARFIDNHTI----EVNGQQYKAPHITIATGGHPLYPDIIGS-ELGETSDDFFGWETLPDSILIVGAGYIAAELAGVVNELGVETHLAFRKDHILRGFDDMVTSEVMAEMEKSGISLHANHVPKSLKRDEGGKLIFEAENGKT-----LVVDRVIWAIGRGPNVD-MGLENTDIVLNDKGYIKTDEFENTSVDGVYAIGDV-NGKIALTPVAIAAGRRLSERLFNHKDNEKLDYHNVPSVIFTHPVIGTVGLSEAAAIEQFGEDNIKVYTSTF--TSMYTAVTTNRQAVKMKLITLGKEEKVIGLHGVGYGIDEMIQGFSVAIKMGATKADFDDTVAIHPTGSEEFVTMR |
2NVK Chain:X ((8-474)) | --YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHE-AAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQ-KDKIPVDSQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYG-GSTQRMDYKDVATTVFTPLEYACVGLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217267 for 3710 contacts (-58.6/contact) +
2D Compatibility (PS) -47712 + (NN) -7220 + (LL) 304
1D Compatibility (HY) -36400 + (ID) 8650
Total energy: -316945.0 ( -85.43 by residue)
QMean score : 0.505
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