Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQVEVDLPNHSYHIKIEEGCFSEAGDWVSHLWQKQMITIITDSNVEILYGESLVNQLKKQGFTVH------VFSFAAGEASKTLEVANRIYGFLAKHHMT--RSDGIIALGGGVVGDLAAFVASTYMRGIHFLQIPTSLTAQVDSSIGGKTGVNTSFAKNMVGTFAQPDGVLIDPVTLKTLGNRELVEGMGEVIKYGLIDDIKLWHILEEMDGTIDSILDSAL---------------AIIYHSCQVKRKHVLADQYDKGLRMHLNFGHTIGHAIEVHAGYGEIMHGEAVAIGMIQLSRVAERKNLMPRGISQDIYNMCL-KFGLPVHYAE-----------WDKDVLFDILSHDKKASGQFIKIVILPQLGSATVHQIPLEEMRDYLEK
1NUA Chain:B ((41-373))--------------------------------------LVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAIL-TPQILHGECVAIGMVKEAELARHLGIL-KGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDK------KKIVLLSAIGTPYETRASVVANEDIRVV


General information:
TITO was launched using:
RESULT:

Template: 1NUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187840 for 2353 contacts (-79.8/contact) +
2D Compatibility (PS) -30526 + (NN) -7736 + (LL) 2928
1D Compatibility (HY) -21200 + (ID) 5750
Total energy: -250124.0 ( -106.30 by residue)
QMean score : 0.368

(partial model without unconserved sides chains):
PDB file : Tito_1NUA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NUA-query.scw
PDB file : Tito_Scwrl_1NUA.pdb: