Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVALIPEKCIACG--LCQTYSN--IFDYQD-DGIVKFSDTDNLEKEVPNSDQDTVLAVKSCPTKALTIL
2IVF Chain:B ((145-201))
---FYLARMCNHCTNPACLAACPTGAIYKREDNGIVL-VD--------QERCKGHRHCVEACPYKAIYFN
General information:
TITO was launched using:
RESULT:
Template:
2IVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25280 for 292 contacts (-86.6/contact) +
2D Compatibility (PS) -5305 + (NN) -468 + (LL) 1132
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -32521.0 ( -111.37 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2IVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IVF-query.scw
PDB file :
Tito_Scwrl_2IVF.pdb
: