Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVIKVKTISETLDYISKHTASVARFGDGEIDIIAGNSIPYQVYDSELAKRLERLLNRQSNEKLVICVSDVFDNLGRYNDFSQQFWRDHLYQYNDLYQKNCQAEWYGSTFISRPYMDLLDKSLSVTYFEQLKALWKNKD---ILIVEGETSRSGVGNDLFNDANTISRIICPSKDAFSSFYEIKETILEHSRGKLILLMLGPTAKLLAEDLSQLGHQAIDLGHIDSEYEWFKMGAVSKVKLSHKHTAEHNFDEDITLIEDNSYENQIVSKIGTSDRQYALTVTLTDDIWELEHLLQRCPNTNFHIAAPVYCSDRLKQLVGYPNYYLHEAITEEQFEVLLLN-----SDIYLDINHGEEVWNVVD----RCITE--GKTIYGIRRARKDNQYISFERT-MDDFEYLCDTIKQNR |
| 4X2Z Chain:A ((9-309)) | QKTIYLTE----------------------------DGVKYRSIVLKPGDSLGQFGQVYAKNKIVFTADDVEDK-------------EILYVPTT---DKSILEYYG-----------LDAQKYVIYLQTLAQKWNVQYRDNFLILEWRD-----GNCWISSAIVLLQA---AKIRFKGFLTEAWAKLLG----------GDPTDFVAWCYASCTA---------------KVGDFSDANWLLANLAEH-FDAD--------YTNAFLKKRVSCNCG-----IKSYELRGLEACIQPVRATNLLHFKTQYSN------CPTCGANNTDEVIEASLPYLLLFATDGPATVDCDEDAVGTVVFVGSTNSGHCYTQAAGQAFDNLAKDRKFGKKSPYITAMYTRFAFK----NETS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4X2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17420 for 2177 contacts (8.0/contact) +
2D Compatibility (PS) -29947 + (NN) 3244 + (LL) 7908
1D Compatibility (HY) -12400 + (ID) 3050
Total energy: -16825.0 ( -7.73 by residue)
QMean score : 0.150
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