Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILREFCAENLTDLTRLDKAIISRVELCDNLA-----------------AGGTTP--SYGVIKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKAIDQLVALGFTRIL--LHGSSNGEPII----ENIKHIKALVEYANNRIEIMVGGGVTA-ENYQYICQETGVRQAHGTRITQ |
| 1RD5 Chain:A ((36-231)) | -----------EALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE---LSCPVVLLSYYKP-----------IMFRSLAKMKEAGVHGLIVPDLPYVA------AHSLWSEAKNNNLELVLLT-----TPAIPEDRMKEITKASEGFVYLVSVNGVT-GPRANVNPRVESLIQEVKK--VTNKPVAVGFGISKPEHVKQIAQ-WGADGVIIGSAMV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82346 for 1177 contacts (-70.0/contact) +
2D Compatibility (PS) -18347 + (NN) -8162 + (LL) 3448
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -111657.0 ( -94.87 by residue)
QMean score : 0.415
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